Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs111895847 chr17:10222718 C/T 1.42E-5 286 26.28 25.75 15.53 KM Plot
KIRP rs11190477 chr10:102092067 C/T 7.74E-12 289 8.6 30.8 25.4 KM Plot
KIRP rs111905715 chr7:20703478 A/G 6.04E-6 287 25.93 24.67 11.2 KM Plot
KIRP rs11191161 chr10:103726528 C/T 4.8E-6 289 16.53 26.28 25.62 KM Plot
KIRP rs11191191 chr10:103800979 G/A 4.64E-6 288 25.62 26.28 14.58 KM Plot
KIRP rs111955223 chr10:43110644 A/G 6.87E-5 289 25.57 27.47 11.43 KM Plot
KIRP rs11198558 chr10:85170175 A/G 3.73E-6 289 13.98 26.4 25.67 KM Plot
KIRP rs111988644 chr10:74872802 C/T 9.99E-15 288 26.37 22.8 5.6 KM Plot
KIRP rs11202039 chr10:88207510 G/C 2.03E-8 287 26.38 22.1 9.77 KM Plot
KIRP rs11202064 chr10:88299731 A/G 1.51E-7 289 26.37 23.1 9.77 KM Plot
KIRP rs112034686 chr12:49870820 G/A 4.13E-6 286 25.53 39.53 10.97 KM Plot
KIRP rs112046953 chr19:48969936 A/G 8.24E-6 283 26.07 24.67 5.72 KM Plot
KIRP rs112076008 chr17:30257165 C/T 1.98E-6 277 26.2 24.3 11.73 KM Plot
KIRP rs112119935 chr3:67973814 T/C 3.65E-13 286 26.1 26.4 13.17 KM Plot
KIRP rs112146402 chr10:43189729 G/A 6.87E-5 289 25.57 27.47 11.43 KM Plot